BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C10SP1|AL427604
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig184 470 e-132
3x_Contig697 328 1e-89
>3x_Contig184
Length = 1475
Score = 470 bits (232), Expect = e-132
Identities = 244/250 (97%)
Strand = Plus / Minus
Query: 1 atccacttgtttgtbattgtaacaaatggtacgaatctttaatcaattcttctttccctg 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atccacttgtttctccttgtaacaaatggtacgaatctttaatcaattcttctttccctg 191
Query: 61 agggtaaagaagttcctacaaatggattctctaatgaattggataggtcatttgccttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agggtaaagaagttcctacaaatggattctctaatgaattggataggtcatttgccttaa 131
Query: 121 ctttcaatgctattcaaagagctgcttctgttttcaataaragatctaaggagactattt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 130 ctttcaatgctattcaaagagctgcttctgttttcaataaaagatctaaggagactattt 71
Query: 181 tggctccatgcaattacgttaaacatgttaacgatgtcttgaacgtaaatttggacaacc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 70 tggctccatgcaattacgttaaacatgttaacgatgtcttgaacgtaaattttgacaacc 11
Query: 241 aggaggrttt 250
|||||| |||
Sbjct: 10 aggaggattt 1
>3x_Contig697
Length = 2508
Score = 328 bits (162), Expect = 1e-89
Identities = 170/172 (98%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 820 tttgttttggtattgttctcactctttaatttaacagggtatatgcttcttgcctaattt 879
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tttgttttggtattgttct-actctttaatttaacagggtatatgcttcttgcctaattt 60
Query: 880 ctgcatgtaccttaaaccagggtgatgtcagccgaaaagaggtcctacagcattgtattc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcatgtaccttaaaccagggtgatgtcagccgaaaagaggtcctacagcattgtattc 120
Query: 940 attgggactgtttacatccgtacattttgagtatagtwttttgtttttttta 991
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 attgggactgtttacatccgtacattttgagtatagtattttgtttttttta 172
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7531
Number of Sequences: 1807
Number of extensions: 7531
Number of successful extensions: 180
Number of sequences better than 1.0e-20: 2
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 50 (101.7 bits)